subproptools
stable

Getting Started:

  • Installation
  • Tips

Contents:

  • Property Extraction Usage
  • Rotation Usage

subproptools API:

  • API
subproptools
  • Welcome to subproptools’s documentation!
  • Edit on GitHub

Welcome to subproptools’s documentation!¶

subproptools is a package used for getting data from .sum files produced by AIMAll software. Created and maintained by the Mawhinney group. subproptools.qtaim_extract contains functions for extracting atomic, group, BCP, and charge concentration properties from .sum files. subproptools.sub_reor contains tools for rotating substituents to the desired coordinate system.

Getting Started:

  • Installation
  • Tips

Contents:

  • Property Extraction Usage
    • Installation
    • Get xyz of atoms in sumfile
    • Extracting Atomic Properties
    • Convert Atomic Properties to Group Properties
    • Extracting BCP Properties
    • Get DI between a substituent and the rest of the molecule
    • Extracting Properties for a set of molecules
    • Charge Concentration Manipulation
    • Get CC, BCP, Group and Atomic propeties for a substituent
  • Rotation Usage
    • Installation
    • Perform Rotation for a Molecule
    • Output Rotated Molecule to gjf file
    • Rotate a Set of Molecules
    • Rotation with Precomputed Atomic and Critical Point Properties

subproptools API:

  • API
    • subproptools.qtaim_extract
    • subproptools.sub_reor

Indices and tables¶

  • Index

  • Module Index

  • Search Page

Next

© Copyright 2023, Kevin Lefrancois-Gagnon, Robert Mawhinney. Revision 1344c2a2.

Built with Sphinx using a theme provided by Read the Docs.